%0 Generic %A Watson-Haigh, Nathan %A Suchecki, Radoslaw %A de Oliveira Santos Garcia, Melissa %A Kalashyan, Elena %A Baumann, Ute %D 2018 %T AC-Barrie WGS vs IWGSC RefSeq v1.0 Genome Assembly %U https://adelaide.figshare.com/articles/dataset/AC-Barrie_WGS_vs_IWGSC_RefSeq_v1_0_Genome_Assembly/5848347 %R 10.4225/55/5a76e4e7c439a %2 https://adelaide.figshare.com/ndownloader/files/12278843 %2 https://adelaide.figshare.com/ndownloader/files/12278750 %2 https://adelaide.figshare.com/ndownloader/files/12278747 %2 https://adelaide.figshare.com/ndownloader/files/12278744 %2 https://adelaide.figshare.com/ndownloader/files/12278741 %2 https://adelaide.figshare.com/ndownloader/files/12278735 %2 https://adelaide.figshare.com/ndownloader/files/12278732 %2 https://adelaide.figshare.com/ndownloader/files/12278729 %2 https://adelaide.figshare.com/ndownloader/files/12278723 %2 https://adelaide.figshare.com/ndownloader/files/12278720 %2 https://adelaide.figshare.com/ndownloader/files/12278717 %2 https://adelaide.figshare.com/ndownloader/files/12278711 %2 https://adelaide.figshare.com/ndownloader/files/12278708 %2 https://adelaide.figshare.com/ndownloader/files/12278705 %2 https://adelaide.figshare.com/ndownloader/files/12278702 %2 https://adelaide.figshare.com/ndownloader/files/12278753 %2 https://adelaide.figshare.com/ndownloader/files/12278759 %2 https://adelaide.figshare.com/ndownloader/files/12278771 %2 https://adelaide.figshare.com/ndownloader/files/12278837 %2 https://adelaide.figshare.com/ndownloader/files/12278828 %2 https://adelaide.figshare.com/ndownloader/files/12278822 %2 https://adelaide.figshare.com/ndownloader/files/12278816 %2 https://adelaide.figshare.com/ndownloader/files/12278813 %2 https://adelaide.figshare.com/ndownloader/files/12278807 %2 https://adelaide.figshare.com/ndownloader/files/12278804 %2 https://adelaide.figshare.com/ndownloader/files/12278801 %2 https://adelaide.figshare.com/ndownloader/files/12278792 %2 https://adelaide.figshare.com/ndownloader/files/12278789 %2 https://adelaide.figshare.com/ndownloader/files/12278786 %2 https://adelaide.figshare.com/ndownloader/files/12278783 %2 https://adelaide.figshare.com/ndownloader/files/12278777 %2 https://adelaide.figshare.com/ndownloader/files/12278774 %2 https://adelaide.figshare.com/ndownloader/files/12278699 %2 https://adelaide.figshare.com/ndownloader/files/12278696 %2 https://adelaide.figshare.com/ndownloader/files/12278642 %2 https://adelaide.figshare.com/ndownloader/files/12278639 %2 https://adelaide.figshare.com/ndownloader/files/12278636 %2 https://adelaide.figshare.com/ndownloader/files/12278630 %2 https://adelaide.figshare.com/ndownloader/files/12278621 %2 https://adelaide.figshare.com/ndownloader/files/12278615 %2 https://adelaide.figshare.com/ndownloader/files/12278612 %2 https://adelaide.figshare.com/ndownloader/files/12278609 %2 https://adelaide.figshare.com/ndownloader/files/12278606 %2 https://adelaide.figshare.com/ndownloader/files/12278603 %2 https://adelaide.figshare.com/ndownloader/files/12278600 %2 https://adelaide.figshare.com/ndownloader/files/12278597 %2 https://adelaide.figshare.com/ndownloader/files/12278594 %2 https://adelaide.figshare.com/ndownloader/files/12278591 %2 https://adelaide.figshare.com/ndownloader/files/12278645 %2 https://adelaide.figshare.com/ndownloader/files/12278648 %2 https://adelaide.figshare.com/ndownloader/files/12278651 %2 https://adelaide.figshare.com/ndownloader/files/12278693 %2 https://adelaide.figshare.com/ndownloader/files/12278690 %2 https://adelaide.figshare.com/ndownloader/files/12278687 %2 https://adelaide.figshare.com/ndownloader/files/12278684 %2 https://adelaide.figshare.com/ndownloader/files/12278681 %2 https://adelaide.figshare.com/ndownloader/files/12278678 %2 https://adelaide.figshare.com/ndownloader/files/12278675 %2 https://adelaide.figshare.com/ndownloader/files/12278672 %2 https://adelaide.figshare.com/ndownloader/files/12278669 %2 https://adelaide.figshare.com/ndownloader/files/12278666 %2 https://adelaide.figshare.com/ndownloader/files/12278663 %2 https://adelaide.figshare.com/ndownloader/files/12278660 %2 https://adelaide.figshare.com/ndownloader/files/12278657 %2 https://adelaide.figshare.com/ndownloader/files/12278654 %2 https://adelaide.figshare.com/ndownloader/files/12278588 %2 https://adelaide.figshare.com/ndownloader/files/12299579 %2 https://adelaide.figshare.com/ndownloader/files/12279179 %2 https://adelaide.figshare.com/ndownloader/files/12279176 %2 https://adelaide.figshare.com/ndownloader/files/12279161 %2 https://adelaide.figshare.com/ndownloader/files/12279158 %2 https://adelaide.figshare.com/ndownloader/files/12279152 %2 https://adelaide.figshare.com/ndownloader/files/12279149 %2 https://adelaide.figshare.com/ndownloader/files/12279146 %2 https://adelaide.figshare.com/ndownloader/files/12279137 %2 https://adelaide.figshare.com/ndownloader/files/12279134 %2 https://adelaide.figshare.com/ndownloader/files/12279116 %2 https://adelaide.figshare.com/ndownloader/files/12279113 %2 https://adelaide.figshare.com/ndownloader/files/12279110 %2 https://adelaide.figshare.com/ndownloader/files/12279098 %2 https://adelaide.figshare.com/ndownloader/files/12279095 %2 https://adelaide.figshare.com/ndownloader/files/12279182 %2 https://adelaide.figshare.com/ndownloader/files/12279203 %2 https://adelaide.figshare.com/ndownloader/files/12279209 %2 https://adelaide.figshare.com/ndownloader/files/12299576 %2 https://adelaide.figshare.com/ndownloader/files/12299573 %2 https://adelaide.figshare.com/ndownloader/files/12299567 %2 https://adelaide.figshare.com/ndownloader/files/12299564 %2 https://adelaide.figshare.com/ndownloader/files/12299528 %2 https://adelaide.figshare.com/ndownloader/files/12296534 %2 https://adelaide.figshare.com/ndownloader/files/12296528 %2 https://adelaide.figshare.com/ndownloader/files/12296519 %2 https://adelaide.figshare.com/ndownloader/files/12296501 %2 https://adelaide.figshare.com/ndownloader/files/12296498 %2 https://adelaide.figshare.com/ndownloader/files/12296270 %2 https://adelaide.figshare.com/ndownloader/files/12279251 %2 https://adelaide.figshare.com/ndownloader/files/12279245 %2 https://adelaide.figshare.com/ndownloader/files/12279236 %2 https://adelaide.figshare.com/ndownloader/files/12279092 %2 https://adelaide.figshare.com/ndownloader/files/12279089 %2 https://adelaide.figshare.com/ndownloader/files/12279023 %2 https://adelaide.figshare.com/ndownloader/files/12279020 %2 https://adelaide.figshare.com/ndownloader/files/12279014 %2 https://adelaide.figshare.com/ndownloader/files/12279011 %2 https://adelaide.figshare.com/ndownloader/files/12279008 %2 https://adelaide.figshare.com/ndownloader/files/12279005 %2 https://adelaide.figshare.com/ndownloader/files/12279002 %2 https://adelaide.figshare.com/ndownloader/files/12278999 %2 https://adelaide.figshare.com/ndownloader/files/12278996 %2 https://adelaide.figshare.com/ndownloader/files/12278987 %2 https://adelaide.figshare.com/ndownloader/files/12278981 %2 https://adelaide.figshare.com/ndownloader/files/12278957 %2 https://adelaide.figshare.com/ndownloader/files/12278933 %2 https://adelaide.figshare.com/ndownloader/files/12278858 %2 https://adelaide.figshare.com/ndownloader/files/12279026 %2 https://adelaide.figshare.com/ndownloader/files/12279029 %2 https://adelaide.figshare.com/ndownloader/files/12279032 %2 https://adelaide.figshare.com/ndownloader/files/12279086 %2 https://adelaide.figshare.com/ndownloader/files/12279080 %2 https://adelaide.figshare.com/ndownloader/files/12279077 %2 https://adelaide.figshare.com/ndownloader/files/12279071 %2 https://adelaide.figshare.com/ndownloader/files/12279068 %2 https://adelaide.figshare.com/ndownloader/files/12279059 %2 https://adelaide.figshare.com/ndownloader/files/12279056 %2 https://adelaide.figshare.com/ndownloader/files/12279053 %2 https://adelaide.figshare.com/ndownloader/files/12279050 %2 https://adelaide.figshare.com/ndownloader/files/12279047 %2 https://adelaide.figshare.com/ndownloader/files/12279044 %2 https://adelaide.figshare.com/ndownloader/files/12279041 %2 https://adelaide.figshare.com/ndownloader/files/12279038 %2 https://adelaide.figshare.com/ndownloader/files/12279035 %2 https://adelaide.figshare.com/ndownloader/files/12278846 %2 https://adelaide.figshare.com/ndownloader/files/12278306 %2 https://adelaide.figshare.com/ndownloader/files/12278087 %2 https://adelaide.figshare.com/ndownloader/files/12278069 %2 https://adelaide.figshare.com/ndownloader/files/12278045 %2 https://adelaide.figshare.com/ndownloader/files/12278018 %2 https://adelaide.figshare.com/ndownloader/files/12277973 %2 https://adelaide.figshare.com/ndownloader/files/12277970 %2 https://adelaide.figshare.com/ndownloader/files/12277964 %2 https://adelaide.figshare.com/ndownloader/files/12277961 %2 https://adelaide.figshare.com/ndownloader/files/12277937 %2 https://adelaide.figshare.com/ndownloader/files/12277934 %2 https://adelaide.figshare.com/ndownloader/files/12277931 %2 https://adelaide.figshare.com/ndownloader/files/12277925 %2 https://adelaide.figshare.com/ndownloader/files/12277913 %2 https://adelaide.figshare.com/ndownloader/files/12278207 %2 https://adelaide.figshare.com/ndownloader/files/12278213 %2 https://adelaide.figshare.com/ndownloader/files/12278219 %2 https://adelaide.figshare.com/ndownloader/files/12278300 %2 https://adelaide.figshare.com/ndownloader/files/12278297 %2 https://adelaide.figshare.com/ndownloader/files/12278291 %2 https://adelaide.figshare.com/ndownloader/files/12278285 %2 https://adelaide.figshare.com/ndownloader/files/12278282 %2 https://adelaide.figshare.com/ndownloader/files/12278270 %2 https://adelaide.figshare.com/ndownloader/files/12278267 %2 https://adelaide.figshare.com/ndownloader/files/12278264 %2 https://adelaide.figshare.com/ndownloader/files/12278249 %2 https://adelaide.figshare.com/ndownloader/files/12278243 %2 https://adelaide.figshare.com/ndownloader/files/12278237 %2 https://adelaide.figshare.com/ndownloader/files/12278228 %2 https://adelaide.figshare.com/ndownloader/files/12278222 %2 https://adelaide.figshare.com/ndownloader/files/12277910 %2 https://adelaide.figshare.com/ndownloader/files/12277895 %2 https://adelaide.figshare.com/ndownloader/files/12277886 %2 https://adelaide.figshare.com/ndownloader/files/12277067 %2 https://adelaide.figshare.com/ndownloader/files/12277064 %2 https://adelaide.figshare.com/ndownloader/files/12277061 %2 https://adelaide.figshare.com/ndownloader/files/12277058 %2 https://adelaide.figshare.com/ndownloader/files/12277055 %2 https://adelaide.figshare.com/ndownloader/files/12277052 %2 https://adelaide.figshare.com/ndownloader/files/12277049 %2 https://adelaide.figshare.com/ndownloader/files/12277046 %2 https://adelaide.figshare.com/ndownloader/files/12277037 %2 https://adelaide.figshare.com/ndownloader/files/12277034 %2 https://adelaide.figshare.com/ndownloader/files/12277031 %2 https://adelaide.figshare.com/ndownloader/files/12277028 %2 https://adelaide.figshare.com/ndownloader/files/10369323 %2 https://adelaide.figshare.com/ndownloader/files/12277070 %2 https://adelaide.figshare.com/ndownloader/files/12277073 %2 https://adelaide.figshare.com/ndownloader/files/12277076 %2 https://adelaide.figshare.com/ndownloader/files/12277877 %2 https://adelaide.figshare.com/ndownloader/files/12277871 %2 https://adelaide.figshare.com/ndownloader/files/12277592 %2 https://adelaide.figshare.com/ndownloader/files/12277559 %2 https://adelaide.figshare.com/ndownloader/files/12277538 %2 https://adelaide.figshare.com/ndownloader/files/12277529 %2 https://adelaide.figshare.com/ndownloader/files/12277484 %2 https://adelaide.figshare.com/ndownloader/files/12277475 %2 https://adelaide.figshare.com/ndownloader/files/12277097 %2 https://adelaide.figshare.com/ndownloader/files/12277094 %2 https://adelaide.figshare.com/ndownloader/files/12277091 %2 https://adelaide.figshare.com/ndownloader/files/12277085 %2 https://adelaide.figshare.com/ndownloader/files/12277082 %2 https://adelaide.figshare.com/ndownloader/files/12278303 %2 https://adelaide.figshare.com/ndownloader/files/12278312 %2 https://adelaide.figshare.com/ndownloader/files/12278585 %2 https://adelaide.figshare.com/ndownloader/files/12278534 %2 https://adelaide.figshare.com/ndownloader/files/12278531 %2 https://adelaide.figshare.com/ndownloader/files/12278528 %2 https://adelaide.figshare.com/ndownloader/files/12278525 %2 https://adelaide.figshare.com/ndownloader/files/12278522 %2 https://adelaide.figshare.com/ndownloader/files/12278519 %2 https://adelaide.figshare.com/ndownloader/files/12278516 %2 https://adelaide.figshare.com/ndownloader/files/12278513 %2 https://adelaide.figshare.com/ndownloader/files/12278510 %2 https://adelaide.figshare.com/ndownloader/files/12278507 %2 https://adelaide.figshare.com/ndownloader/files/12278498 %2 https://adelaide.figshare.com/ndownloader/files/12278495 %2 https://adelaide.figshare.com/ndownloader/files/12278492 %2 https://adelaide.figshare.com/ndownloader/files/12278489 %2 https://adelaide.figshare.com/ndownloader/files/12278537 %2 https://adelaide.figshare.com/ndownloader/files/12278540 %2 https://adelaide.figshare.com/ndownloader/files/12278582 %2 https://adelaide.figshare.com/ndownloader/files/12278579 %2 https://adelaide.figshare.com/ndownloader/files/12278576 %2 https://adelaide.figshare.com/ndownloader/files/12278573 %2 https://adelaide.figshare.com/ndownloader/files/12278570 %2 https://adelaide.figshare.com/ndownloader/files/12278567 %2 https://adelaide.figshare.com/ndownloader/files/12278564 %2 https://adelaide.figshare.com/ndownloader/files/12278561 %2 https://adelaide.figshare.com/ndownloader/files/12278558 %2 https://adelaide.figshare.com/ndownloader/files/12278555 %2 https://adelaide.figshare.com/ndownloader/files/12278552 %2 https://adelaide.figshare.com/ndownloader/files/12278549 %2 https://adelaide.figshare.com/ndownloader/files/12278546 %2 https://adelaide.figshare.com/ndownloader/files/12278543 %2 https://adelaide.figshare.com/ndownloader/files/12278477 %2 https://adelaide.figshare.com/ndownloader/files/12278471 %2 https://adelaide.figshare.com/ndownloader/files/12278393 %2 https://adelaide.figshare.com/ndownloader/files/12278384 %2 https://adelaide.figshare.com/ndownloader/files/12278381 %2 https://adelaide.figshare.com/ndownloader/files/12278375 %2 https://adelaide.figshare.com/ndownloader/files/12278369 %2 https://adelaide.figshare.com/ndownloader/files/12278366 %2 https://adelaide.figshare.com/ndownloader/files/12278363 %2 https://adelaide.figshare.com/ndownloader/files/12278357 %2 https://adelaide.figshare.com/ndownloader/files/12278354 %2 https://adelaide.figshare.com/ndownloader/files/12278348 %2 https://adelaide.figshare.com/ndownloader/files/12278339 %2 https://adelaide.figshare.com/ndownloader/files/12278327 %2 https://adelaide.figshare.com/ndownloader/files/12278324 %2 https://adelaide.figshare.com/ndownloader/files/12278396 %2 https://adelaide.figshare.com/ndownloader/files/12278402 %2 https://adelaide.figshare.com/ndownloader/files/12278405 %2 https://adelaide.figshare.com/ndownloader/files/12278462 %2 https://adelaide.figshare.com/ndownloader/files/12278456 %2 https://adelaide.figshare.com/ndownloader/files/12278453 %2 https://adelaide.figshare.com/ndownloader/files/12278450 %2 https://adelaide.figshare.com/ndownloader/files/12278444 %2 https://adelaide.figshare.com/ndownloader/files/12278441 %2 https://adelaide.figshare.com/ndownloader/files/12278438 %2 https://adelaide.figshare.com/ndownloader/files/12278432 %2 https://adelaide.figshare.com/ndownloader/files/12278318 %2 https://adelaide.figshare.com/ndownloader/files/12278408 %2 https://adelaide.figshare.com/ndownloader/files/12278411 %2 https://adelaide.figshare.com/ndownloader/files/12278414 %2 https://adelaide.figshare.com/ndownloader/files/12278423 %2 https://adelaide.figshare.com/ndownloader/files/12278426 %2 https://adelaide.figshare.com/ndownloader/files/10369179 %2 https://adelaide.figshare.com/ndownloader/files/10369101 %2 https://adelaide.figshare.com/ndownloader/files/10369086 %2 https://adelaide.figshare.com/ndownloader/files/10369503 %2 https://adelaide.figshare.com/ndownloader/files/10368975 %K BAM %K VCF %K bigWig %K wheat %K AC-Barrie %K IWGSC %K Bioinformatics Software %K Bioinformatics %K Genomics %X WGS reads of AC-Barrie (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC Triticum aestivum Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q>=30) homozygous; Het = high quality (Q>=30) heterozygous; LowQualHom = low quality (Q<30) homozygous; LowQualHet = low quality (Q<30) heterozygous. Files are provided separately for each chromosome part. %I The University of Adelaide