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commonmerge.vcf (193.72 MB)
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commonmerge_noheader.vcf (193.71 MB)
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NA12878_sorted_noheader.vcf (434.72 MB)
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NA12878_sorted.vcf (434.72 MB)
TEXT
NA12877_noheader.vcf (420.43 MB)
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NA12878_hifi_whatshap.vcf (462.81 MB)
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NA12878_whatshap_pacbio.vcf (463.24 MB)
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NA12878_hifi_haplomaker.hap (58.08 MB)
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NA12878_haplomaker_pacbio.hap (59.17 MB)
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NA12877_25X_hapcompass_q3.txt (81.73 MB)
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NA12877_25X_haplomaker.hap (43.55 MB)
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NA12877_25X_whatshap_phased.vcf (431.29 MB)
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NA12877_10X_hapcompass_q5.hap (45.53 MB)
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NA12877_10X_haplomaker.hap (22.9 MB)
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NA12877_10X_whatshap_phased_q5.vcf (203.37 MB)
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NA12878_hapcut2_pruned_pacbio.hap (112.47 MB)
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NA12878_hifi_hapcut2_pruned.hap (99.48 MB)
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NA12877_25X_hapcut2.hap (92.19 MB)
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NA12877_10X_hapcut2_q5.hap (50.66 MB)
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HaploMaker paper Files
Version 3 2022-02-16, 14:31
Version 2 2022-02-16, 14:14
Version 1 2022-01-14, 06:15
dataset
posted on 2022-02-16, 14:31 authored by Mario FruzangoharMario FruzangoharAll vcf files required to run the commands:
commonmerge.vcf
NA12878_sorted.vcf
NA12878_sorted_noheader.vcf
NA12877_noheader.vcf
HaploMaker Outputs:
NA12877_10X_haplomaker.hap
NA12877_25X_haplomaker.hap
NA12878_hifi_haplomaker.hap
NA12878_haplomaker_pacbio.hap
HapCompass Outputs:
NA12877_10X_hapcompass_q5.txt
NA12877_25X_hapcompass_q3.txt
WhatsHap outputs:
NA12877_10X_whatshap_phased_q5.vcf
NA12877_25X_whatshap_phased.vcf
NA12878_hifi_whatshap.vcf
NA12878_whatshap_pacbio.vcf
Hapcut2 outputs:
NA12877_10X_hapcut2_q5.hap
NA12877_25X_hapcut2.hap
NA12878_hifi_hapcut2_pruned.hap
NA12878_hapcut2_pruned_pacbio.hap
