DAWN: Diversity Among Wheat geNomes

Published on 2018-07-10T12:57:07Z (GMT) by Nathan Watson-Haigh
This collection contains files related to the alignment of Illumina sequence data from 16 wheat accessions, plus Chinese Spring, to the IWGSC <i>Triticum aestivum</i> RefSeq v1.0 genome assembly. Included files are: BAM files (and associated indexes), read alignment coverage files (bigWig) and VCF files containing SNP calls (associated indexes) and SNP density (SNPs per 10 kbp) bigWig files.<br><br><div>The raw Illumina sequence data for Chinese Spring and 16 wheat accessions are available from the ENA (PRJNA392179) or Bioplatforms Australia (BPA). The 16 non-Chinese Spring accessions include the following:<u><b><br></b></u></div><div><u><b>- Australian:</b></u></div> * Baxter<br> * Chara<br> * Drysdale<br> * Excalibur<br> * Gladius<br> * H-45<br> * Kukri<br> * RAC-875<br> * Westonia<br> * Wyalkatchem<br> * Yitpi<br><u><b> - Canadian:</b></u><br> * AC-Barrie<br><u><b> - USA:</b></u><br> * Alsen<br><b><u> - CIMMYT:</u></b><br> * Pastor<br><b><u> - Israel:</u></b><br> * Volcani-DD-1<br><u> - Chinese:</u><br><div> * Xiaoyan-54</div>

Cite this collection

Watson-Haigh, Nathan; Suchecki, Radoslaw; Kalashyan, Elena; Garcia, Melissa; Baumann, Ute (2018): DAWN: Diversity Among Wheat geNomes. The University of Adelaide. Collection. https://doi.org/10.4225/55/5a76e03723567